WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y11D7A.9.1 Sequence Name  Y11D7A.9.1
Length (nt)  1198   Chromosome Location  IV: 9253974-9256117
Chromosome . Primary Identifier  IV Chromosome Location . Start  9253974
Chromosome Location . End  9256117 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y11D7A.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012433 Y11D7A.9 Y11D7A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y11D7A.9 Y11D7A.9 894   IV: 9254260-9254335

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y11D7A.9.1 9253974 9256117 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136717   362   IV: 9253974-9254335 Caenorhabditis elegans
Exon136718   100   IV: 9254409-9254508 Caenorhabditis elegans
Exon136719   109   IV: 9254827-9254935 Caenorhabditis elegans
Exon136720   104   IV: 9255005-9255108 Caenorhabditis elegans
Exon136721   144   IV: 9255158-9255301 Caenorhabditis elegans
Exon136722   115   IV: 9255423-9255537 Caenorhabditis elegans
Exon136723   124   IV: 9255597-9255720 Caenorhabditis elegans
Exon136724   140   IV: 9255978-9256117 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y11D7A.9.1 9253974 9256117 -1

1 Sequence

Length
1198

1 Sequence Ontology Term

Identifier Name Description
transcript