WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y11D7A.12b.1 Sequence Name  Y11D7A.12b.1
Length (nt)  1849   Chromosome Location  IV: 9261807-9264270
Chromosome . Primary Identifier  IV Chromosome Location . Start  9261807
Chromosome Location . End  9264270 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y11D7A.12b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012435 flh-1 Y11D7A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y11D7A.12b Y11D7A.12b 1515   IV: 9262102-9262602

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y11D7A.12b.1 9261807 9264270 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136715   796   IV: 9261807-9262602 Caenorhabditis elegans
Exon136719   771   IV: 9262658-9263428 Caenorhabditis elegans
Exon136723   226   IV: 9263477-9263702 Caenorhabditis elegans
Exon136725   56   IV: 9264215-9264270 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y11D7A.12b.1 9261807 9264270 -1

1 Sequence

Length
1849

1 Sequence Ontology Term

Identifier Name Description
transcript