WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y11D7A.14.1 Sequence Name  Y11D7A.14.1
Length (nt)  4580   Chromosome Location  IV: 9274479-9283113
Chromosome . Primary Identifier  IV Chromosome Location . Start  9274479
Chromosome Location . End  9283113 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y11D7A.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012437 nmy-3 Y11D7A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y11D7A.14 Y11D7A.14 4395   IV: 9274547-9274590

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y11D7A.14.1 9274479 9283113 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136736   112   IV: 9274479-9274590 Caenorhabditis elegans
Exon136737   160   IV: 9274981-9275140 Caenorhabditis elegans
Exon136738   135   IV: 9276395-9276529 Caenorhabditis elegans
Exon136739   179   IV: 9276635-9276813 Caenorhabditis elegans
Exon136740   169   IV: 9276926-9277094 Caenorhabditis elegans
Exon136741   64   IV: 9277187-9277250 Caenorhabditis elegans
Exon136742   336   IV: 9277299-9277634 Caenorhabditis elegans
Exon136744   119   IV: 9278481-9278599 Caenorhabditis elegans
Exon136745   106   IV: 9278644-9278749 Caenorhabditis elegans
Exon136746   230   IV: 9278828-9279057 Caenorhabditis elegans
Exon136747   292   IV: 9279128-9279419 Caenorhabditis elegans
Exon136748   68   IV: 9279557-9279624 Caenorhabditis elegans
Exon136749   125   IV: 9279738-9279862 Caenorhabditis elegans
Exon136750   562   IV: 9279910-9280471 Caenorhabditis elegans
Exon136751   75   IV: 9280519-9280593 Caenorhabditis elegans
Exon136752   114   IV: 9280655-9280768 Caenorhabditis elegans
Exon136753   87   IV: 9280842-9280928 Caenorhabditis elegans
Exon136754   146   IV: 9281076-9281221 Caenorhabditis elegans
Exon136755   91   IV: 9281269-9281359 Caenorhabditis elegans
Exon136756   144   IV: 9281420-9281563 Caenorhabditis elegans
Exon136757   497   IV: 9281630-9282126 Caenorhabditis elegans
Exon136758   85   IV: 9282211-9282295 Caenorhabditis elegans
Exon136759   505   IV: 9282383-9282887 Caenorhabditis elegans
Exon136760   179   IV: 9282935-9283113 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y11D7A.14.1 9274479 9283113 1

1 Sequence

Length
4580

1 Sequence Ontology Term

Identifier Name Description
transcript