WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49C12.8 Sequence Name  F49C12.8
Length (nt)  1233   Chromosome Location  IV: 9316643-9316705
Chromosome . Primary Identifier  IV Chromosome Location . Start  9316643
Chromosome Location . End  9316705
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49C12.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03368 RPN-7 47.6 410 Caenorhabditis elegans
 

Other

37 RNAi

WormBase ID
WBRNAi00095629
WBRNAi00108316
WBRNAi00066896
WBRNAi00099852
WBRNAi00100419
WBRNAi00085471
WBRNAi00008195
WBRNAi00000183
WBRNAi00008823
WBRNAi00025557
WBRNAi00001665
WBRNAi00080719
WBRNAi00047808
WBRNAi00100793
WBRNAi00099246
WBRNAi00099650
WBRNAi00099448
WBRNAi00032519
WBRNAi00022815
WBRNAi00114583
WBRNAi00100045
WBRNAi00100232
WBRNAi00108857
WBRNAi00108912
WBRNAi00108967
WBRNAi00080746
WBRNAi00080758
WBRNAi00080690
WBRNAi00100606
WBRNAi00100980

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49C12.8 9316643 9316705 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004463 rpn-7 F49C12.8 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49C12.8 9316643 9316705 1
CDS:F49C12.8 9316751 9317593 1
CDS:F49C12.8 9317644 9317970 1

1 Sequence

Length
1233

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49C12.8.2 F49C12.8.2 1403   IV: 9316631-9318128
Transcript:F49C12.8.1 F49C12.8.1 1899   IV: 9316639-9318632