WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20D3.14.1 Sequence Name  T20D3.14.1
Length (nt)  633   Chromosome Location  IV: 9334351-9335891
Chromosome . Primary Identifier  IV Chromosome Location . Start  9334351
Chromosome Location . End  9335891 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20D3.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00303026 T20D3.14 T20D3.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20D3.14 T20D3.14 276   IV: 9335509-9335601

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20D3.14.1 9334351 9335891 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136901   55   IV: 9334351-9334405 Caenorhabditis elegans
Exon136902   99   IV: 9334459-9334557 Caenorhabditis elegans
Exon136906   64   IV: 9335266-9335329 Caenorhabditis elegans
Exon136910   228   IV: 9335374-9335601 Caenorhabditis elegans
Exon136913   82   IV: 9335651-9335732 Caenorhabditis elegans
Exon136915   105   IV: 9335787-9335891 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20D3.14.1 9334351 9335891 -1

1 Sequence

Length
633

1 Sequence Ontology Term

Identifier Name Description
transcript