WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20D3.5.1 Sequence Name  T20D3.5.1
Length (nt)  1226   Chromosome Location  IV: 9337040-9338567
Chromosome . Primary Identifier  IV Chromosome Location . Start  9337040
Chromosome Location . End  9338567 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20D3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011858 T20D3.5 T20D3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20D3.5 T20D3.5 666   IV: 9337311-9337361

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20D3.5.1 9337040 9338567 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136917   322   IV: 9337040-9337361 Caenorhabditis elegans
Exon136918   73   IV: 9337408-9337480 Caenorhabditis elegans
Exon136919   218   IV: 9337529-9337746 Caenorhabditis elegans
Exon136920   144   IV: 9337832-9337975 Caenorhabditis elegans
Exon136921   469   IV: 9338099-9338567 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20D3.5.1 9337040 9338567 1

1 Sequence

Length
1226

1 Sequence Ontology Term

Identifier Name Description
transcript