WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20D3.7b.1 Sequence Name  T20D3.7b.1
Length (nt)  1071   Chromosome Location  IV: 9339801-9341634
Chromosome . Primary Identifier  IV Chromosome Location . Start  9339801
Chromosome Location . End  9341634 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20D3.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006931 vps-26 T20D3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20D3.7b T20D3.7b 1071   IV: 9339801-9340004

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20D3.7b.1 9339801 9341634 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136929   204   IV: 9339801-9340004 Caenorhabditis elegans
Exon136932   484   IV: 9340287-9340770 Caenorhabditis elegans
Exon136936   157   IV: 9340847-9341003 Caenorhabditis elegans
Exon136940   154   IV: 9341354-9341507 Caenorhabditis elegans
Exon136943   72   IV: 9341563-9341634 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20D3.7b.1 9339801 9341634 -1

1 Sequence

Length
1071

1 Sequence Ontology Term

Identifier Name Description
transcript