WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20D3.8.1 Sequence Name  T20D3.8.1
Length (nt)  896   Chromosome Location  IV: 9341964-9343152
Chromosome . Primary Identifier  IV Chromosome Location . Start  9341964
Chromosome Location . End  9343152 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20D3.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011860 pigc-1 T20D3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20D3.8 T20D3.8 849   IV: 9341993-9342359

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20D3.8.1 9341964 9343152 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136947   396   IV: 9341964-9342359 Caenorhabditis elegans
Exon136948   102   IV: 9342433-9342534 Caenorhabditis elegans
Exon136949   173   IV: 9342580-9342752 Caenorhabditis elegans
Exon136950   101   IV: 9342809-9342909 Caenorhabditis elegans
Exon136951   124   IV: 9343029-9343152 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20D3.8.1 9341964 9343152 -1

1 Sequence

Length
896

1 Sequence Ontology Term

Identifier Name Description
transcript