WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.1a.1 Sequence Name  C10C5.1a.1
Length (nt)  7751   Chromosome Location  IV: 9343359-9366510
Chromosome . Primary Identifier  IV Chromosome Location . Start  9343359
Chromosome Location . End  9366510 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007505 pezo-1 C10C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.1a C10C5.1a 7317   IV: 9343737-9343823

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10C5.1a.1 9343359 9366510 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136952   465   IV: 9343359-9343823 Caenorhabditis elegans
Exon136964   134   IV: 9343890-9344023 Caenorhabditis elegans
Exon136976   584   IV: 9344074-9344657 Caenorhabditis elegans
Exon136988   591   IV: 9345003-9345593 Caenorhabditis elegans
Exon137000   583   IV: 9345647-9346229 Caenorhabditis elegans
Exon137012   115   IV: 9346281-9346395 Caenorhabditis elegans
Exon137024   915   IV: 9346454-9347368 Caenorhabditis elegans
Exon137037   131   IV: 9349033-9349163 Caenorhabditis elegans
Exon137049   65   IV: 9350360-9350424 Caenorhabditis elegans
Exon137060   111   IV: 9350476-9350586 Caenorhabditis elegans
Exon137071   54   IV: 9351514-9351567 Caenorhabditis elegans
Exon137082   233   IV: 9351616-9351848 Caenorhabditis elegans
Exon137093   515   IV: 9351897-9352411 Caenorhabditis elegans
Exon137104   104   IV: 9352458-9352561 Caenorhabditis elegans
Exon137115   572   IV: 9352840-9353411 Caenorhabditis elegans
Exon137126   125   IV: 9353466-9353590 Caenorhabditis elegans
Exon137140   191   IV: 9359446-9359636 Caenorhabditis elegans
Exon137148   92   IV: 9359781-9359872 Caenorhabditis elegans
Exon137156   105   IV: 9360598-9360702 Caenorhabditis elegans
Exon137164   174   IV: 9361792-9361965 Caenorhabditis elegans
Exon137174   156   IV: 9362972-9363127 Caenorhabditis elegans
Exon137182   132   IV: 9363440-9363571 Caenorhabditis elegans
Exon137190   129   IV: 9363619-9363747 Caenorhabditis elegans
Exon137198   98   IV: 9363871-9363968 Caenorhabditis elegans
Exon137206   157   IV: 9364022-9364178 Caenorhabditis elegans
Exon137214   114   IV: 9364720-9364833 Caenorhabditis elegans
Exon137218   99   IV: 9365071-9365169 Caenorhabditis elegans
Exon137226   234   IV: 9365247-9365480 Caenorhabditis elegans
Exon137234   229   IV: 9365529-9365757 Caenorhabditis elegans
Exon137242   248   IV: 9365807-9366054 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10C5.1a.1 9343359 9366510 -1

1 Sequence

Length
7751

1 Sequence Ontology Term

Identifier Name Description
transcript