WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.1b.1 Sequence Name  C10C5.1b.1
Length (nt)  7638   Chromosome Location  IV: 9343359-9366511
Chromosome . Primary Identifier  IV Chromosome Location . Start  9343359
Chromosome Location . End  9366511 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007505 pezo-1 C10C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.1b C10C5.1b 7203   IV: 9343737-9343823

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10C5.1b.1 9343359 9366511 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136953   465   IV: 9343359-9343823 Caenorhabditis elegans
Exon136965   134   IV: 9343890-9344023 Caenorhabditis elegans
Exon136977   584   IV: 9344074-9344657 Caenorhabditis elegans
Exon136989   591   IV: 9345003-9345593 Caenorhabditis elegans
Exon137001   583   IV: 9345647-9346229 Caenorhabditis elegans
Exon137013   115   IV: 9346281-9346395 Caenorhabditis elegans
Exon137025   915   IV: 9346454-9347368 Caenorhabditis elegans
Exon137038   131   IV: 9349033-9349163 Caenorhabditis elegans
Exon137050   65   IV: 9350360-9350424 Caenorhabditis elegans
Exon137061   111   IV: 9350476-9350586 Caenorhabditis elegans
Exon137072   54   IV: 9351514-9351567 Caenorhabditis elegans
Exon137083   233   IV: 9351616-9351848 Caenorhabditis elegans
Exon137094   515   IV: 9351897-9352411 Caenorhabditis elegans
Exon137105   104   IV: 9352458-9352561 Caenorhabditis elegans
Exon137116   572   IV: 9352840-9353411 Caenorhabditis elegans
Exon137127   125   IV: 9353466-9353590 Caenorhabditis elegans
Exon137141   191   IV: 9359446-9359636 Caenorhabditis elegans
Exon137149   92   IV: 9359781-9359872 Caenorhabditis elegans
Exon137157   105   IV: 9360598-9360702 Caenorhabditis elegans
Exon137165   174   IV: 9361792-9361965 Caenorhabditis elegans
Exon137175   156   IV: 9362972-9363127 Caenorhabditis elegans
Exon137183   132   IV: 9363440-9363571 Caenorhabditis elegans
Exon137191   129   IV: 9363619-9363747 Caenorhabditis elegans
Exon137199   98   IV: 9363871-9363968 Caenorhabditis elegans
Exon137207   157   IV: 9364022-9364178 Caenorhabditis elegans
Exon137219   99   IV: 9365071-9365169 Caenorhabditis elegans
Exon137227   234   IV: 9365247-9365480 Caenorhabditis elegans
Exon137235   229   IV: 9365529-9365757 Caenorhabditis elegans
Exon137243   248   IV: 9365807-9366054 Caenorhabditis elegans
Exon137251   74   IV: 9366099-9366172 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10C5.1b.1 9343359 9366511 -1

1 Sequence

Length
7638

1 Sequence Ontology Term

Identifier Name Description
transcript