WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.1f.1 Sequence Name  C10C5.1f.1
Length (nt)  7636   Chromosome Location  IV: 9343362-9366506
Chromosome . Primary Identifier  IV Chromosome Location . Start  9343362
Chromosome Location . End  9366506 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007505 pezo-1 C10C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.1f C10C5.1f 7209   IV: 9343737-9343823

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.1f.1 9343362 9366506 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136954   462   IV: 9343362-9343823 Caenorhabditis elegans
Exon136969   134   IV: 9343890-9344023 Caenorhabditis elegans
Exon136981   584   IV: 9344074-9344657 Caenorhabditis elegans
Exon136993   591   IV: 9345003-9345593 Caenorhabditis elegans
Exon137005   583   IV: 9345647-9346229 Caenorhabditis elegans
Exon137017   115   IV: 9346281-9346395 Caenorhabditis elegans
Exon137029   915   IV: 9346454-9347368 Caenorhabditis elegans
Exon137042   131   IV: 9349033-9349163 Caenorhabditis elegans
Exon137054   65   IV: 9350360-9350424 Caenorhabditis elegans
Exon137065   111   IV: 9350476-9350586 Caenorhabditis elegans
Exon137076   54   IV: 9351514-9351567 Caenorhabditis elegans
Exon137087   233   IV: 9351616-9351848 Caenorhabditis elegans
Exon137098   515   IV: 9351897-9352411 Caenorhabditis elegans
Exon137109   104   IV: 9352458-9352561 Caenorhabditis elegans
Exon137120   572   IV: 9352840-9353411 Caenorhabditis elegans
Exon137131   125   IV: 9353466-9353590 Caenorhabditis elegans
Exon137145   191   IV: 9359446-9359636 Caenorhabditis elegans
Exon137153   92   IV: 9359781-9359872 Caenorhabditis elegans
Exon137161   105   IV: 9360598-9360702 Caenorhabditis elegans
Exon137169   180   IV: 9361792-9361971 Caenorhabditis elegans
Exon137179   156   IV: 9362972-9363127 Caenorhabditis elegans
Exon137187   132   IV: 9363440-9363571 Caenorhabditis elegans
Exon137195   129   IV: 9363619-9363747 Caenorhabditis elegans
Exon137201   98   IV: 9363871-9363968 Caenorhabditis elegans
Exon137211   157   IV: 9364022-9364178 Caenorhabditis elegans
Exon137223   99   IV: 9365071-9365169 Caenorhabditis elegans
Exon137231   234   IV: 9365247-9365480 Caenorhabditis elegans
Exon137239   229   IV: 9365529-9365757 Caenorhabditis elegans
Exon137247   248   IV: 9365807-9366054 Caenorhabditis elegans
Exon137255   74   IV: 9366099-9366172 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.1f.1 9343362 9366506 -1

1 Sequence

Length
7636

1 Sequence Ontology Term

Identifier Name Description
transcript