WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.1d.1 Sequence Name  C10C5.1d.1
Length (nt)  7640   Chromosome Location  IV: 9343362-9366510
Chromosome . Primary Identifier  IV Chromosome Location . Start  9343362
Chromosome Location . End  9366510 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007505 pezo-1 C10C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.1d C10C5.1d 7209   IV: 9343737-9343823

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.1d.1 9343362 9366510 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136955   462   IV: 9343362-9343823 Caenorhabditis elegans
Exon136967   134   IV: 9343890-9344023 Caenorhabditis elegans
Exon136979   584   IV: 9344074-9344657 Caenorhabditis elegans
Exon136991   591   IV: 9345003-9345593 Caenorhabditis elegans
Exon137003   583   IV: 9345647-9346229 Caenorhabditis elegans
Exon137015   115   IV: 9346281-9346395 Caenorhabditis elegans
Exon137027   915   IV: 9346454-9347368 Caenorhabditis elegans
Exon137040   131   IV: 9349033-9349163 Caenorhabditis elegans
Exon137052   65   IV: 9350360-9350424 Caenorhabditis elegans
Exon137063   111   IV: 9350476-9350586 Caenorhabditis elegans
Exon137074   54   IV: 9351514-9351567 Caenorhabditis elegans
Exon137085   233   IV: 9351616-9351848 Caenorhabditis elegans
Exon137096   515   IV: 9351897-9352411 Caenorhabditis elegans
Exon137107   104   IV: 9352458-9352561 Caenorhabditis elegans
Exon137118   572   IV: 9352840-9353411 Caenorhabditis elegans
Exon137129   125   IV: 9353466-9353590 Caenorhabditis elegans
Exon137143   191   IV: 9359446-9359636 Caenorhabditis elegans
Exon137151   92   IV: 9359781-9359872 Caenorhabditis elegans
Exon137159   105   IV: 9360598-9360702 Caenorhabditis elegans
Exon137167   174   IV: 9361792-9361965 Caenorhabditis elegans
Exon137177   156   IV: 9362972-9363127 Caenorhabditis elegans
Exon137185   132   IV: 9363440-9363571 Caenorhabditis elegans
Exon137193   129   IV: 9363619-9363747 Caenorhabditis elegans
Exon137203   104   IV: 9363871-9363974 Caenorhabditis elegans
Exon137209   157   IV: 9364022-9364178 Caenorhabditis elegans
Exon137221   99   IV: 9365071-9365169 Caenorhabditis elegans
Exon137229   234   IV: 9365247-9365480 Caenorhabditis elegans
Exon137237   229   IV: 9365529-9365757 Caenorhabditis elegans
Exon137245   248   IV: 9365807-9366054 Caenorhabditis elegans
Exon137253   74   IV: 9366099-9366172 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.1d.1 9343362 9366510 -1

1 Sequence

Length
7640

1 Sequence Ontology Term

Identifier Name Description
transcript