WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.1l.1 Sequence Name  C10C5.1l.1
Length (nt)  3117   Chromosome Location  IV: 9343737-9349140
Chromosome . Primary Identifier  IV Chromosome Location . Start  9343737
Chromosome Location . End  9349140 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.1l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007505 pezo-1 C10C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.1l C10C5.1l 3117   IV: 9343737-9343823

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10C5.1l.1 9343737 9349140 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136957   87   IV: 9343737-9343823 Caenorhabditis elegans
Exon136975   134   IV: 9343890-9344023 Caenorhabditis elegans
Exon136987   584   IV: 9344074-9344657 Caenorhabditis elegans
Exon136999   591   IV: 9345003-9345593 Caenorhabditis elegans
Exon137011   583   IV: 9345647-9346229 Caenorhabditis elegans
Exon137023   115   IV: 9346281-9346395 Caenorhabditis elegans
Exon137035   915   IV: 9346454-9347368 Caenorhabditis elegans
Exon137036   108   IV: 9349033-9349140 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10C5.1l.1 9343737 9349140 -1

1 Sequence

Length
3117

1 Sequence Ontology Term

Identifier Name Description
transcript