WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.1c.1 Sequence Name  C10C5.1c.1
Length (nt)  7323   Chromosome Location  IV: 9343737-9366454
Chromosome . Primary Identifier  IV Chromosome Location . Start  9343737
Chromosome Location . End  9366454 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007505 pezo-1 C10C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.1c C10C5.1c 7323   IV: 9343737-9343823

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.1c.1 9343737 9366454 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136960   87   IV: 9343737-9343823 Caenorhabditis elegans
Exon136966   134   IV: 9343890-9344023 Caenorhabditis elegans
Exon136978   584   IV: 9344074-9344657 Caenorhabditis elegans
Exon136990   591   IV: 9345003-9345593 Caenorhabditis elegans
Exon137002   583   IV: 9345647-9346229 Caenorhabditis elegans
Exon137014   115   IV: 9346281-9346395 Caenorhabditis elegans
Exon137026   915   IV: 9346454-9347368 Caenorhabditis elegans
Exon137039   131   IV: 9349033-9349163 Caenorhabditis elegans
Exon137051   65   IV: 9350360-9350424 Caenorhabditis elegans
Exon137062   111   IV: 9350476-9350586 Caenorhabditis elegans
Exon137073   54   IV: 9351514-9351567 Caenorhabditis elegans
Exon137084   233   IV: 9351616-9351848 Caenorhabditis elegans
Exon137095   515   IV: 9351897-9352411 Caenorhabditis elegans
Exon137106   104   IV: 9352458-9352561 Caenorhabditis elegans
Exon137117   572   IV: 9352840-9353411 Caenorhabditis elegans
Exon137128   125   IV: 9353466-9353590 Caenorhabditis elegans
Exon137142   191   IV: 9359446-9359636 Caenorhabditis elegans
Exon137150   92   IV: 9359781-9359872 Caenorhabditis elegans
Exon137158   105   IV: 9360598-9360702 Caenorhabditis elegans
Exon137166   174   IV: 9361792-9361965 Caenorhabditis elegans
Exon137176   156   IV: 9362972-9363127 Caenorhabditis elegans
Exon137184   132   IV: 9363440-9363571 Caenorhabditis elegans
Exon137192   129   IV: 9363619-9363747 Caenorhabditis elegans
Exon137202   104   IV: 9363871-9363974 Caenorhabditis elegans
Exon137208   157   IV: 9364022-9364178 Caenorhabditis elegans
Exon137215   114   IV: 9364720-9364833 Caenorhabditis elegans
Exon137220   99   IV: 9365071-9365169 Caenorhabditis elegans
Exon137228   234   IV: 9365247-9365480 Caenorhabditis elegans
Exon137236   229   IV: 9365529-9365757 Caenorhabditis elegans
Exon137244   248   IV: 9365807-9366054 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.1c.1 9343737 9366454 -1

1 Sequence

Length
7323

1 Sequence Ontology Term

Identifier Name Description
transcript