WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.1g.1 Sequence Name  C10C5.1g.1
Length (nt)  7329   Chromosome Location  IV: 9343737-9366454
Chromosome . Primary Identifier  IV Chromosome Location . Start  9343737
Chromosome Location . End  9366454 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007505 pezo-1 C10C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.1g C10C5.1g 7329   IV: 9343737-9343823

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.1g.1 9343737 9366454 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136962   87   IV: 9343737-9343823 Caenorhabditis elegans
Exon136970   134   IV: 9343890-9344023 Caenorhabditis elegans
Exon136982   584   IV: 9344074-9344657 Caenorhabditis elegans
Exon136994   591   IV: 9345003-9345593 Caenorhabditis elegans
Exon137006   583   IV: 9345647-9346229 Caenorhabditis elegans
Exon137018   115   IV: 9346281-9346395 Caenorhabditis elegans
Exon137030   915   IV: 9346454-9347368 Caenorhabditis elegans
Exon137043   131   IV: 9349033-9349163 Caenorhabditis elegans
Exon137055   65   IV: 9350360-9350424 Caenorhabditis elegans
Exon137066   111   IV: 9350476-9350586 Caenorhabditis elegans
Exon137077   54   IV: 9351514-9351567 Caenorhabditis elegans
Exon137088   233   IV: 9351616-9351848 Caenorhabditis elegans
Exon137099   515   IV: 9351897-9352411 Caenorhabditis elegans
Exon137110   104   IV: 9352458-9352561 Caenorhabditis elegans
Exon137121   572   IV: 9352840-9353411 Caenorhabditis elegans
Exon137132   125   IV: 9353466-9353590 Caenorhabditis elegans
Exon137146   191   IV: 9359446-9359636 Caenorhabditis elegans
Exon137154   92   IV: 9359781-9359872 Caenorhabditis elegans
Exon137162   105   IV: 9360598-9360702 Caenorhabditis elegans
Exon137170   180   IV: 9361792-9361971 Caenorhabditis elegans
Exon137180   156   IV: 9362972-9363127 Caenorhabditis elegans
Exon137188   132   IV: 9363440-9363571 Caenorhabditis elegans
Exon137196   129   IV: 9363619-9363747 Caenorhabditis elegans
Exon137204   104   IV: 9363871-9363974 Caenorhabditis elegans
Exon137212   157   IV: 9364022-9364178 Caenorhabditis elegans
Exon137217   114   IV: 9364720-9364833 Caenorhabditis elegans
Exon137224   99   IV: 9365071-9365169 Caenorhabditis elegans
Exon137232   234   IV: 9365247-9365480 Caenorhabditis elegans
Exon137240   229   IV: 9365529-9365757 Caenorhabditis elegans
Exon137248   248   IV: 9365807-9366054 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.1g.1 9343737 9366454 -1

1 Sequence

Length
7329

1 Sequence Ontology Term

Identifier Name Description
transcript