WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.1h.1 Sequence Name  C10C5.1h.1
Length (nt)  7215   Chromosome Location  IV: 9343737-9366454
Chromosome . Primary Identifier  IV Chromosome Location . Start  9343737
Chromosome Location . End  9366454 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007505 pezo-1 C10C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.1h C10C5.1h 7215   IV: 9343737-9343823

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10C5.1h.1 9343737 9366454 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136963   87   IV: 9343737-9343823 Caenorhabditis elegans
Exon136971   134   IV: 9343890-9344023 Caenorhabditis elegans
Exon136983   584   IV: 9344074-9344657 Caenorhabditis elegans
Exon136995   591   IV: 9345003-9345593 Caenorhabditis elegans
Exon137007   583   IV: 9345647-9346229 Caenorhabditis elegans
Exon137019   115   IV: 9346281-9346395 Caenorhabditis elegans
Exon137031   915   IV: 9346454-9347368 Caenorhabditis elegans
Exon137044   131   IV: 9349033-9349163 Caenorhabditis elegans
Exon137056   65   IV: 9350360-9350424 Caenorhabditis elegans
Exon137067   111   IV: 9350476-9350586 Caenorhabditis elegans
Exon137078   54   IV: 9351514-9351567 Caenorhabditis elegans
Exon137089   233   IV: 9351616-9351848 Caenorhabditis elegans
Exon137100   515   IV: 9351897-9352411 Caenorhabditis elegans
Exon137111   104   IV: 9352458-9352561 Caenorhabditis elegans
Exon137122   572   IV: 9352840-9353411 Caenorhabditis elegans
Exon137133   125   IV: 9353466-9353590 Caenorhabditis elegans
Exon137147   191   IV: 9359446-9359636 Caenorhabditis elegans
Exon137155   92   IV: 9359781-9359872 Caenorhabditis elegans
Exon137163   105   IV: 9360598-9360702 Caenorhabditis elegans
Exon137171   180   IV: 9361792-9361971 Caenorhabditis elegans
Exon137181   156   IV: 9362972-9363127 Caenorhabditis elegans
Exon137189   132   IV: 9363440-9363571 Caenorhabditis elegans
Exon137197   129   IV: 9363619-9363747 Caenorhabditis elegans
Exon137205   104   IV: 9363871-9363974 Caenorhabditis elegans
Exon137213   157   IV: 9364022-9364178 Caenorhabditis elegans
Exon137225   99   IV: 9365071-9365169 Caenorhabditis elegans
Exon137233   234   IV: 9365247-9365480 Caenorhabditis elegans
Exon137241   229   IV: 9365529-9365757 Caenorhabditis elegans
Exon137249   248   IV: 9365807-9366054 Caenorhabditis elegans
Exon137257   74   IV: 9366099-9366172 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10C5.1h.1 9343737 9366454 -1

1 Sequence

Length
7215

1 Sequence Ontology Term

Identifier Name Description
transcript