WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.6c.1 Sequence Name  C10C5.6c.1
Length (nt)  5403   Chromosome Location  IV: 9386208-9394533
Chromosome . Primary Identifier  IV Chromosome Location . Start  9386208
Chromosome Location . End  9394533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000911 daf-15 C10C5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.6c C10C5.6c 5403   IV: 9386208-9386272

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.6c.1 9386208 9394533 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137310   65   IV: 9386208-9386272 Caenorhabditis elegans
Exon137313   82   IV: 9386457-9386538 Caenorhabditis elegans
Exon137318   98   IV: 9386603-9386700 Caenorhabditis elegans
Exon137323   222   IV: 9386919-9387140 Caenorhabditis elegans
Exon137330   297   IV: 9387266-9387562 Caenorhabditis elegans
Exon137333   127   IV: 9387612-9387738 Caenorhabditis elegans
Exon137338   370   IV: 9388110-9388479 Caenorhabditis elegans
Exon137343   180   IV: 9388536-9388715 Caenorhabditis elegans
Exon137348   734   IV: 9388759-9389492 Caenorhabditis elegans
Exon137353   863   IV: 9389561-9390423 Caenorhabditis elegans
Exon137358   109   IV: 9390470-9390578 Caenorhabditis elegans
Exon137363   217   IV: 9391010-9391226 Caenorhabditis elegans
Exon137369   162   IV: 9391287-9391448 Caenorhabditis elegans
Exon137373   159   IV: 9391495-9391653 Caenorhabditis elegans
Exon137378   532   IV: 9391703-9392234 Caenorhabditis elegans
Exon137383   312   IV: 9392718-9393029 Caenorhabditis elegans
Exon137388   206   IV: 9393091-9393296 Caenorhabditis elegans
Exon137393   215   IV: 9393697-9393911 Caenorhabditis elegans
Exon137398   329   IV: 9393961-9394289 Caenorhabditis elegans
Exon137401   124   IV: 9394410-9394533 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.6c.1 9386208 9394533 1

1 Sequence

Length
5403

1 Sequence Ontology Term

Identifier Name Description
transcript