WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:C10C5.6e.1 Sequence Name  C10C5.6e.1
Length (nt)  5772   Chromosome Location  IV: 9386450-9394933
Chromosome . Primary Identifier  IV Chromosome Location . Start  9386450
Chromosome Location . End  9394933 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.6e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000911 daf-15 C10C5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.6e C10C5.6e 5358   IV: 9386464-9386538

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10C5.6e.1 9386450 9394933 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137311   89   IV: 9386450-9386538 Caenorhabditis elegans
Exon137320   98   IV: 9386603-9386700 Caenorhabditis elegans
Exon137325   222   IV: 9386919-9387140 Caenorhabditis elegans
Exon137327   306   IV: 9387257-9387562 Caenorhabditis elegans
Exon137335   127   IV: 9387612-9387738 Caenorhabditis elegans
Exon137340   370   IV: 9388110-9388479 Caenorhabditis elegans
Exon137345   180   IV: 9388536-9388715 Caenorhabditis elegans
Exon137350   734   IV: 9388759-9389492 Caenorhabditis elegans
Exon137355   863   IV: 9389561-9390423 Caenorhabditis elegans
Exon137360   109   IV: 9390470-9390578 Caenorhabditis elegans
Exon137365   217   IV: 9391010-9391226 Caenorhabditis elegans
Exon137367   180   IV: 9391269-9391448 Caenorhabditis elegans
Exon137375   159   IV: 9391495-9391653 Caenorhabditis elegans
Exon137380   532   IV: 9391703-9392234 Caenorhabditis elegans
Exon137385   312   IV: 9392718-9393029 Caenorhabditis elegans
Exon137390   206   IV: 9393091-9393296 Caenorhabditis elegans
Exon137395   215   IV: 9393697-9393911 Caenorhabditis elegans
Exon137400   329   IV: 9393961-9394289 Caenorhabditis elegans
Exon137404   524   IV: 9394410-9394933 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10C5.6e.1 9386450 9394933 1

1 Sequence

Length
5772

1 Sequence Ontology Term

Identifier Name Description
transcript