WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.6a.1 Sequence Name  C10C5.6a.1
Length (nt)  5738   Chromosome Location  IV: 9386457-9394933
Chromosome . Primary Identifier  IV Chromosome Location . Start  9386457
Chromosome Location . End  9394933 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000911 daf-15 C10C5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.6a C10C5.6a 5331   IV: 9386464-9386538

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.6a.1 9386457 9394933 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137315   82   IV: 9386457-9386538 Caenorhabditis elegans
Exon137316   98   IV: 9386603-9386700 Caenorhabditis elegans
Exon137321   222   IV: 9386919-9387140 Caenorhabditis elegans
Exon137328   297   IV: 9387266-9387562 Caenorhabditis elegans
Exon137331   127   IV: 9387612-9387738 Caenorhabditis elegans
Exon137336   370   IV: 9388110-9388479 Caenorhabditis elegans
Exon137341   180   IV: 9388536-9388715 Caenorhabditis elegans
Exon137346   734   IV: 9388759-9389492 Caenorhabditis elegans
Exon137351   863   IV: 9389561-9390423 Caenorhabditis elegans
Exon137356   109   IV: 9390470-9390578 Caenorhabditis elegans
Exon137361   217   IV: 9391010-9391226 Caenorhabditis elegans
Exon137368   162   IV: 9391287-9391448 Caenorhabditis elegans
Exon137371   159   IV: 9391495-9391653 Caenorhabditis elegans
Exon137376   532   IV: 9391703-9392234 Caenorhabditis elegans
Exon137381   312   IV: 9392718-9393029 Caenorhabditis elegans
Exon137386   206   IV: 9393091-9393296 Caenorhabditis elegans
Exon137391   215   IV: 9393697-9393911 Caenorhabditis elegans
Exon137396   329   IV: 9393961-9394289 Caenorhabditis elegans
Exon137403   524   IV: 9394410-9394933 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.6a.1 9386457 9394933 1

1 Sequence

Length
5738

1 Sequence Ontology Term

Identifier Name Description
transcript