WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.6b.1 Sequence Name  C10C5.6b.1
Length (nt)  5809   Chromosome Location  IV: 9386450-9394979
Chromosome . Primary Identifier  IV Chromosome Location . Start  9386450
Chromosome Location . End  9394979 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000911 daf-15 C10C5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.6b C10C5.6b 5349   IV: 9386464-9386538

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.6b.1 9386450 9394979 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137333   89   IV: 9386450-9386538 Caenorhabditis elegans
Exon137338   98   IV: 9386603-9386700 Caenorhabditis elegans
Exon137343   222   IV: 9386919-9387140 Caenorhabditis elegans
Exon137350   297   IV: 9387266-9387562 Caenorhabditis elegans
Exon137353   127   IV: 9387612-9387738 Caenorhabditis elegans
Exon137358   370   IV: 9388110-9388479 Caenorhabditis elegans
Exon137363   180   IV: 9388536-9388715 Caenorhabditis elegans
Exon137368   734   IV: 9388759-9389492 Caenorhabditis elegans
Exon137373   863   IV: 9389561-9390423 Caenorhabditis elegans
Exon137378   109   IV: 9390470-9390578 Caenorhabditis elegans
Exon137383   217   IV: 9391010-9391226 Caenorhabditis elegans
Exon137387   180   IV: 9391269-9391448 Caenorhabditis elegans
Exon137393   159   IV: 9391495-9391653 Caenorhabditis elegans
Exon137398   532   IV: 9391703-9392234 Caenorhabditis elegans
Exon137403   312   IV: 9392718-9393029 Caenorhabditis elegans
Exon137408   206   IV: 9393091-9393296 Caenorhabditis elegans
Exon137413   215   IV: 9393697-9393911 Caenorhabditis elegans
Exon137418   329   IV: 9393961-9394289 Caenorhabditis elegans
Exon137426   570   IV: 9394410-9394979 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.6b.1 9386450 9394979 1

1 Sequence

Length
5809

1 Sequence Ontology Term

Identifier Name Description
transcript