WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.6d.1 Sequence Name  C10C5.6d.1
Length (nt)  5347   Chromosome Location  IV: 9386457-9394533
Chromosome . Primary Identifier  IV Chromosome Location . Start  9386457
Chromosome Location . End  9394533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.6d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000911 daf-15 C10C5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.6d C10C5.6d 5340   IV: 9386464-9386538

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.6d.1 9386457 9394533 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137335   82   IV: 9386457-9386538 Caenorhabditis elegans
Exon137340   98   IV: 9386603-9386700 Caenorhabditis elegans
Exon137345   222   IV: 9386919-9387140 Caenorhabditis elegans
Exon137347   306   IV: 9387257-9387562 Caenorhabditis elegans
Exon137355   127   IV: 9387612-9387738 Caenorhabditis elegans
Exon137360   370   IV: 9388110-9388479 Caenorhabditis elegans
Exon137365   180   IV: 9388536-9388715 Caenorhabditis elegans
Exon137370   734   IV: 9388759-9389492 Caenorhabditis elegans
Exon137375   863   IV: 9389561-9390423 Caenorhabditis elegans
Exon137380   109   IV: 9390470-9390578 Caenorhabditis elegans
Exon137385   217   IV: 9391010-9391226 Caenorhabditis elegans
Exon137391   162   IV: 9391287-9391448 Caenorhabditis elegans
Exon137395   159   IV: 9391495-9391653 Caenorhabditis elegans
Exon137400   532   IV: 9391703-9392234 Caenorhabditis elegans
Exon137405   312   IV: 9392718-9393029 Caenorhabditis elegans
Exon137410   206   IV: 9393091-9393296 Caenorhabditis elegans
Exon137415   215   IV: 9393697-9393911 Caenorhabditis elegans
Exon137420   329   IV: 9393961-9394289 Caenorhabditis elegans
Exon137423   124   IV: 9394410-9394533 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.6d.1 9386457 9394533 1

1 Sequence

Length
5347

1 Sequence Ontology Term

Identifier Name Description
transcript