WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.6a.1 Sequence Name  C10C5.6a.1
Length (nt)  5738   Chromosome Location  IV: 9386457-9394933
Chromosome . Primary Identifier  IV Chromosome Location . Start  9386457
Chromosome Location . End  9394933 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000911 daf-15 C10C5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.6a C10C5.6a 5331   IV: 9386464-9386538

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.6a.1 9386457 9394933 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137336   82   IV: 9386457-9386538 Caenorhabditis elegans
Exon137337   98   IV: 9386603-9386700 Caenorhabditis elegans
Exon137342   222   IV: 9386919-9387140 Caenorhabditis elegans
Exon137349   297   IV: 9387266-9387562 Caenorhabditis elegans
Exon137352   127   IV: 9387612-9387738 Caenorhabditis elegans
Exon137357   370   IV: 9388110-9388479 Caenorhabditis elegans
Exon137362   180   IV: 9388536-9388715 Caenorhabditis elegans
Exon137367   734   IV: 9388759-9389492 Caenorhabditis elegans
Exon137372   863   IV: 9389561-9390423 Caenorhabditis elegans
Exon137377   109   IV: 9390470-9390578 Caenorhabditis elegans
Exon137382   217   IV: 9391010-9391226 Caenorhabditis elegans
Exon137389   162   IV: 9391287-9391448 Caenorhabditis elegans
Exon137392   159   IV: 9391495-9391653 Caenorhabditis elegans
Exon137397   532   IV: 9391703-9392234 Caenorhabditis elegans
Exon137402   312   IV: 9392718-9393029 Caenorhabditis elegans
Exon137407   206   IV: 9393091-9393296 Caenorhabditis elegans
Exon137412   215   IV: 9393697-9393911 Caenorhabditis elegans
Exon137417   329   IV: 9393961-9394289 Caenorhabditis elegans
Exon137424   524   IV: 9394410-9394933 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.6a.1 9386457 9394933 1

1 Sequence

Length
5738

1 Sequence Ontology Term

Identifier Name Description
transcript