WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.6c.1 Sequence Name  C10C5.6c.1
Length (nt)  5403   Chromosome Location  IV: 9386208-9394533
Chromosome . Primary Identifier  IV Chromosome Location . Start  9386208
Chromosome Location . End  9394533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000911 daf-15 C10C5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.6c C10C5.6c 5403   IV: 9386208-9386272

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.6c.1 9386208 9394533 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137365   65   IV: 9386208-9386272 Caenorhabditis elegans
Exon137368   82   IV: 9386457-9386538 Caenorhabditis elegans
Exon137373   98   IV: 9386603-9386700 Caenorhabditis elegans
Exon137378   222   IV: 9386919-9387140 Caenorhabditis elegans
Exon137385   297   IV: 9387266-9387562 Caenorhabditis elegans
Exon137388   127   IV: 9387612-9387738 Caenorhabditis elegans
Exon137393   370   IV: 9388110-9388479 Caenorhabditis elegans
Exon137398   180   IV: 9388536-9388715 Caenorhabditis elegans
Exon137403   734   IV: 9388759-9389492 Caenorhabditis elegans
Exon137408   863   IV: 9389561-9390423 Caenorhabditis elegans
Exon137413   109   IV: 9390470-9390578 Caenorhabditis elegans
Exon137418   217   IV: 9391010-9391226 Caenorhabditis elegans
Exon137424   162   IV: 9391287-9391448 Caenorhabditis elegans
Exon137428   159   IV: 9391495-9391653 Caenorhabditis elegans
Exon137433   532   IV: 9391703-9392234 Caenorhabditis elegans
Exon137438   312   IV: 9392718-9393029 Caenorhabditis elegans
Exon137443   206   IV: 9393091-9393296 Caenorhabditis elegans
Exon137448   215   IV: 9393697-9393911 Caenorhabditis elegans
Exon137453   329   IV: 9393961-9394289 Caenorhabditis elegans
Exon137456   124   IV: 9394410-9394533 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.6c.1 9386208 9394533 1

1 Sequence

Length
5403

1 Sequence Ontology Term

Identifier Name Description
transcript