WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D5.3.1 Sequence Name  F56D5.3.1
Length (nt)  1439   Chromosome Location  IV: 9399653-9401293
Chromosome . Primary Identifier  IV Chromosome Location . Start  9399653
Chromosome Location . End  9401293 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010148 F56D5.3 F56D5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D5.3 F56D5.3 1350   IV: 9399698-9399943

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D5.3.1 9399653 9401293 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137418   291   IV: 9399653-9399943 Caenorhabditis elegans
Exon137419   687   IV: 9400045-9400731 Caenorhabditis elegans
Exon137421   278   IV: 9400781-9401058 Caenorhabditis elegans
Exon137423   183   IV: 9401111-9401293 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D5.3.1 9399653 9401293 1

1 Sequence

Length
1439

1 Sequence Ontology Term

Identifier Name Description
transcript