WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D5.6a.1 Sequence Name  F56D5.6a.1
Length (nt)  1726   Chromosome Location  IV: 9401922-9412663
Chromosome . Primary Identifier  IV Chromosome Location . Start  9401922
Chromosome Location . End  9412663 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D5.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010150 F56D5.6 F56D5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D5.6a F56D5.6a 1350   IV: 9402063-9402126

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D5.6a.1 9401922 9412663 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137425   205   IV: 9401922-9402126 Caenorhabditis elegans
Exon137428   51   IV: 9402260-9402310 Caenorhabditis elegans
Exon137439   65   IV: 9405620-9405684 Caenorhabditis elegans
Exon137441   97   IV: 9405732-9405828 Caenorhabditis elegans
Exon137443   75   IV: 9406552-9406626 Caenorhabditis elegans
Exon137444   159   IV: 9406707-9406865 Caenorhabditis elegans
Exon137446   147   IV: 9406922-9407068 Caenorhabditis elegans
Exon137449   260   IV: 9408756-9409015 Caenorhabditis elegans
Exon137451   91   IV: 9409062-9409152 Caenorhabditis elegans
Exon137453   210   IV: 9409196-9409405 Caenorhabditis elegans
Exon137456   366   IV: 9412298-9412663 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D5.6a.1 9401922 9412663 1

1 Sequence

Length
1726

1 Sequence Ontology Term

Identifier Name Description
transcript