WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D5.6b.1 Sequence Name  F56D5.6b.1
Length (nt)  1641   Chromosome Location  IV: 9401930-9412661
Chromosome . Primary Identifier  IV Chromosome Location . Start  9401930
Chromosome Location . End  9412661 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D5.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010150 F56D5.6 F56D5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D5.6b F56D5.6b 1275   IV: 9402063-9402126

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D5.6b.1 9401930 9412661 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137481   197   IV: 9401930-9402126 Caenorhabditis elegans
Exon137484   51   IV: 9402260-9402310 Caenorhabditis elegans
Exon137495   65   IV: 9405620-9405684 Caenorhabditis elegans
Exon137497   97   IV: 9405732-9405828 Caenorhabditis elegans
Exon137500   159   IV: 9406707-9406865 Caenorhabditis elegans
Exon137502   147   IV: 9406922-9407068 Caenorhabditis elegans
Exon137505   260   IV: 9408756-9409015 Caenorhabditis elegans
Exon137507   91   IV: 9409062-9409152 Caenorhabditis elegans
Exon137509   210   IV: 9409196-9409405 Caenorhabditis elegans
Exon137510   364   IV: 9412298-9412661 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D5.6b.1 9401930 9412661 1

1 Sequence

Length
1641

1 Sequence Ontology Term

Identifier Name Description
transcript