WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D5.10.1 Sequence Name  F56D5.10.1
Length (nt)  852   Chromosome Location  IV: 9423395-9424415
Chromosome . Primary Identifier  IV Chromosome Location . Start  9423395
Chromosome Location . End  9424415 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D5.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010153 srxa-2 F56D5.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D5.10 F56D5.10 852   IV: 9423395-9423530

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D5.10.1 9423395 9424415 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137468   136   IV: 9423395-9423530 Caenorhabditis elegans
Exon137469   176   IV: 9423603-9423778 Caenorhabditis elegans
Exon137470   339   IV: 9423826-9424164 Caenorhabditis elegans
Exon137471   201   IV: 9424215-9424415 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D5.10.1 9423395 9424415 1

1 Sequence

Length
852

1 Sequence Ontology Term

Identifier Name Description
transcript