WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38E11.9.1 Sequence Name  F38E11.9.1
Length (nt)  933   Chromosome Location  IV: 9442877-9444040
Chromosome . Primary Identifier  IV Chromosome Location . Start  9442877
Chromosome Location . End  9444040 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38E11.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009544 F38E11.9 F38E11.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38E11.9 F38E11.9 897   IV: 9442905-9443087

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F38E11.9.1 9442877 9444040 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137552   211   IV: 9442877-9443087 Caenorhabditis elegans
Exon137553   174   IV: 9443131-9443304 Caenorhabditis elegans
Exon137554   103   IV: 9443353-9443455 Caenorhabditis elegans
Exon137555   171   IV: 9443506-9443676 Caenorhabditis elegans
Exon137556   116   IV: 9443722-9443837 Caenorhabditis elegans
Exon137557   158   IV: 9443883-9444040 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F38E11.9.1 9442877 9444040 -1

1 Sequence

Length
933

1 Sequence Ontology Term

Identifier Name Description
transcript