WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38E11.6a.1 Sequence Name  F38E11.6a.1
Length (nt)  1643   Chromosome Location  IV: 9463957-9467518
Chromosome . Primary Identifier  IV Chromosome Location . Start  9463957
Chromosome Location . End  9467518 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38E11.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009543 F38E11.6 F38E11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38E11.6a F38E11.6a 1251   IV: 9464314-9464343

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F38E11.6a.1 9463957 9467518 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137608   387   IV: 9463957-9464343 Caenorhabditis elegans
Exon137612   109   IV: 9464766-9464874 Caenorhabditis elegans
Exon137614   95   IV: 9464923-9465017 Caenorhabditis elegans
Exon137616   102   IV: 9465071-9465172 Caenorhabditis elegans
Exon137618   86   IV: 9465228-9465313 Caenorhabditis elegans
Exon137620   190   IV: 9465362-9465551 Caenorhabditis elegans
Exon137622   86   IV: 9465673-9465758 Caenorhabditis elegans
Exon137624   76   IV: 9466019-9466094 Caenorhabditis elegans
Exon137626   89   IV: 9466142-9466230 Caenorhabditis elegans
Exon137628   88   IV: 9466347-9466434 Caenorhabditis elegans
Exon137631   155   IV: 9466629-9466783 Caenorhabditis elegans
Exon137635   180   IV: 9467339-9467518 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F38E11.6a.1 9463957 9467518 -1

1 Sequence

Length
1643

1 Sequence Ontology Term

Identifier Name Description
transcript