WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38E11.6b.1 Sequence Name  F38E11.6b.1
Length (nt)  1257   Chromosome Location  IV: 9464314-9467483
Chromosome . Primary Identifier  IV Chromosome Location . Start  9464314
Chromosome Location . End  9467483 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38E11.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009543 F38E11.6 F38E11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38E11.6b F38E11.6b 1257   IV: 9464314-9464343

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F38E11.6b.1 9464314 9467483 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137609   30   IV: 9464314-9464343 Caenorhabditis elegans
Exon137613   109   IV: 9464766-9464874 Caenorhabditis elegans
Exon137615   101   IV: 9464923-9465023 Caenorhabditis elegans
Exon137617   102   IV: 9465071-9465172 Caenorhabditis elegans
Exon137619   86   IV: 9465228-9465313 Caenorhabditis elegans
Exon137621   190   IV: 9465362-9465551 Caenorhabditis elegans
Exon137623   86   IV: 9465673-9465758 Caenorhabditis elegans
Exon137625   76   IV: 9466019-9466094 Caenorhabditis elegans
Exon137627   89   IV: 9466142-9466230 Caenorhabditis elegans
Exon137629   88   IV: 9466347-9466434 Caenorhabditis elegans
Exon137632   155   IV: 9466629-9466783 Caenorhabditis elegans
Exon137634   145   IV: 9467339-9467483 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F38E11.6b.1 9464314 9467483 -1

1 Sequence

Length
1257

1 Sequence Ontology Term

Identifier Name Description
transcript