WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33A12.6a.1 Sequence Name  C33A12.6a.1
Length (nt)  1689   Chromosome Location  IV: 9500311-9502574
Chromosome . Primary Identifier  IV Chromosome Location . Start  9500311
Chromosome Location . End  9502574 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33A12.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007885 ugt-21 C33A12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33A12.6a C33A12.6a 1605   IV: 9500326-9500478

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33A12.6a.1 9500311 9502574 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137707   168   IV: 9500311-9500478 Caenorhabditis elegans
Exon137709   177   IV: 9500702-9500878 Caenorhabditis elegans
Exon137711   133   IV: 9500986-9501118 Caenorhabditis elegans
Exon137713   263   IV: 9501173-9501435 Caenorhabditis elegans
Exon137715   453   IV: 9501484-9501936 Caenorhabditis elegans
Exon137717   233   IV: 9501985-9502217 Caenorhabditis elegans
Exon137720   262   IV: 9502313-9502574 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33A12.6a.1 9500311 9502574 1

1 Sequence

Length
1689

1 Sequence Ontology Term

Identifier Name Description
transcript