WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33A12.3a.1 Sequence Name  C33A12.3a.1
Length (nt)  1081   Chromosome Location  IV: 9510748-9513002
Chromosome . Primary Identifier  IV Chromosome Location . Start  9510748
Chromosome Location . End  9513002 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33A12.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007882 C33A12.3 C33A12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33A12.3a C33A12.3a 693   IV: 9511127-9511252

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33A12.3a.1 9510748 9513002 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137797   505   IV: 9510748-9511252 Caenorhabditis elegans
Exon137801   92   IV: 9512084-9512175 Caenorhabditis elegans
Exon137802   90   IV: 9512222-9512311 Caenorhabditis elegans
Exon137803   130   IV: 9512396-9512525 Caenorhabditis elegans
Exon137804   54   IV: 9512592-9512645 Caenorhabditis elegans
Exon137805   72   IV: 9512703-9512774 Caenorhabditis elegans
Exon137806   138   IV: 9512865-9513002 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33A12.3a.1 9510748 9513002 -1

1 Sequence

Length
1081

1 Sequence Ontology Term

Identifier Name Description
transcript