WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56H11.1c.1 Sequence Name  F56H11.1c.1
Length (nt)  2390   Chromosome Location  IV: 9540806-9546252
Chromosome . Primary Identifier  IV Chromosome Location . Start  9540806
Chromosome Location . End  9546252 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H11.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001403 fbl-1 F56H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H11.1c F56H11.1c 2187   IV: 9540852-9540891

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H11.1c.1 9540806 9546252 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137798   86   IV: 9540806-9540891 Caenorhabditis elegans
Exon137808   236   IV: 9541045-9541280 Caenorhabditis elegans
Exon137816   154   IV: 9541328-9541481 Caenorhabditis elegans
Exon137824   153   IV: 9541601-9541753 Caenorhabditis elegans
Exon137830   258   IV: 9542035-9542292 Caenorhabditis elegans
Exon137840   76   IV: 9542968-9543043 Caenorhabditis elegans
Exon137848   110   IV: 9543087-9543196 Caenorhabditis elegans
Exon137856   141   IV: 9543295-9543435 Caenorhabditis elegans
Exon137864   104   IV: 9543534-9543637 Caenorhabditis elegans
Exon137868   81   IV: 9543679-9543759 Caenorhabditis elegans
Exon137872   325   IV: 9543806-9544130 Caenorhabditis elegans
Exon137880   127   IV: 9544219-9544345 Caenorhabditis elegans
Exon137896   239   IV: 9545334-9545572 Caenorhabditis elegans
Exon137903   300   IV: 9545953-9546252 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H11.1c.1 9540806 9546252 1

1 Sequence

Length
2390

1 Sequence Ontology Term

Identifier Name Description
transcript