WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56H11.1b.1 Sequence Name  F56H11.1b.1
Length (nt)  2242   Chromosome Location  IV: 9540835-9546250
Chromosome . Primary Identifier  IV Chromosome Location . Start  9540835
Chromosome Location . End  9546250 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001403 fbl-1 F56H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H11.1b F56H11.1b 2070   IV: 9540852-9540891

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H11.1b.1 9540835 9546250 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137801   57   IV: 9540835-9540891 Caenorhabditis elegans
Exon137807   236   IV: 9541045-9541280 Caenorhabditis elegans
Exon137815   154   IV: 9541328-9541481 Caenorhabditis elegans
Exon137823   153   IV: 9541601-9541753 Caenorhabditis elegans
Exon137835   141   IV: 9542728-9542868 Caenorhabditis elegans
Exon137839   76   IV: 9542968-9543043 Caenorhabditis elegans
Exon137847   110   IV: 9543087-9543196 Caenorhabditis elegans
Exon137855   141   IV: 9543295-9543435 Caenorhabditis elegans
Exon137863   104   IV: 9543534-9543637 Caenorhabditis elegans
Exon137867   81   IV: 9543679-9543759 Caenorhabditis elegans
Exon137871   325   IV: 9543806-9544130 Caenorhabditis elegans
Exon137879   127   IV: 9544219-9544345 Caenorhabditis elegans
Exon137895   239   IV: 9545334-9545572 Caenorhabditis elegans
Exon137902   298   IV: 9545953-9546250 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H11.1b.1 9540835 9546250 1

1 Sequence

Length
2242

1 Sequence Ontology Term

Identifier Name Description
transcript