WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56H11.1a.1 Sequence Name  F56H11.1a.1
Length (nt)  2288   Chromosome Location  IV: 9540808-9545216
Chromosome . Primary Identifier  IV Chromosome Location . Start  9540808
Chromosome Location . End  9545216 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001403 fbl-1 F56H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H11.1a F56H11.1a 2139   IV: 9540852-9540891

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H11.1a.1 9540808 9545216 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137820   84   IV: 9540808-9540891 Caenorhabditis elegans
Exon137827   236   IV: 9541045-9541280 Caenorhabditis elegans
Exon137835   154   IV: 9541328-9541481 Caenorhabditis elegans
Exon137843   153   IV: 9541601-9541753 Caenorhabditis elegans
Exon137855   141   IV: 9542728-9542868 Caenorhabditis elegans
Exon137859   76   IV: 9542968-9543043 Caenorhabditis elegans
Exon137867   110   IV: 9543087-9543196 Caenorhabditis elegans
Exon137875   141   IV: 9543295-9543435 Caenorhabditis elegans
Exon137883   104   IV: 9543534-9543637 Caenorhabditis elegans
Exon137887   81   IV: 9543679-9543759 Caenorhabditis elegans
Exon137891   325   IV: 9543806-9544130 Caenorhabditis elegans
Exon137899   127   IV: 9544219-9544345 Caenorhabditis elegans
Exon137907   206   IV: 9544495-9544700 Caenorhabditis elegans
Exon137913   350   IV: 9544867-9545216 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H11.1a.1 9540808 9545216 1

1 Sequence

Length
2288

1 Sequence Ontology Term

Identifier Name Description
transcript