WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05A1.5b Sequence Name  T05A1.5b
Length (nt)  1032   Chromosome Location  IV: 9546359-9546383
Chromosome . Primary Identifier  IV Chromosome Location . Start  9546359
Chromosome Location . End  9546383
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A1.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39276 T05A1.5, isoform b 38.4 343 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00078641
WBRNAi00052429
WBRNAi00052430
WBRNAi00018167
WBRNAi00018169
WBRNAi00035159
WBRNAi00078537

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05A1.5b 9546359 9546383 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011456 T05A1.5 T05A1.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05A1.5b 9546359 9546383 1
CDS:T05A1.5b 9547437 9547596 1
CDS:T05A1.5b 9547653 9547797 1
CDS:T05A1.5b 9547859 9547962 1
CDS:T05A1.5b 9548015 9548141 1
CDS:T05A1.5b 9559078 9559277 1
CDS:T05A1.5b 9559391 9559661 1

1 Sequence

Length
1032

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05A1.5b.1 T05A1.5b.1 1735   IV: 9546286-9560446