WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05A1.3a.1 Sequence Name  T05A1.3a.1
Length (nt)  2333   Chromosome Location  IV: 9560782-9566605
Chromosome . Primary Identifier  IV Chromosome Location . Start  9560782
Chromosome Location . End  9566605 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A1.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011454 lron-14 T05A1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05A1.3a T05A1.3a 2244   IV: 9560871-9560970

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05A1.3a.1 9560782 9566605 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137929   189   IV: 9560782-9560970 Caenorhabditis elegans
Exon137932   162   IV: 9561025-9561186 Caenorhabditis elegans
Exon137934   293   IV: 9561254-9561546 Caenorhabditis elegans
Exon137937   96   IV: 9562108-9562203 Caenorhabditis elegans
Exon137939   174   IV: 9562361-9562534 Caenorhabditis elegans
Exon137943   75   IV: 9562848-9562922 Caenorhabditis elegans
Exon137946   111   IV: 9562968-9563078 Caenorhabditis elegans
Exon137949   108   IV: 9564537-9564644 Caenorhabditis elegans
Exon137950   117   IV: 9564935-9565051 Caenorhabditis elegans
Exon137951   130   IV: 9565114-9565243 Caenorhabditis elegans
Exon137952   258   IV: 9565290-9565547 Caenorhabditis elegans
Exon137953   126   IV: 9565589-9565714 Caenorhabditis elegans
Exon137954   149   IV: 9565763-9565911 Caenorhabditis elegans
Exon137955   183   IV: 9565957-9566139 Caenorhabditis elegans
Exon137956   162   IV: 9566444-9566605 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05A1.3a.1 9560782 9566605 -1

1 Sequence

Length
2333

1 Sequence Ontology Term

Identifier Name Description
transcript