WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27C8.6.1 Sequence Name  F27C8.6.1
Length (nt)  1520   Chromosome Location  IV: 9587096-9588834
Chromosome . Primary Identifier  IV Chromosome Location . Start  9587096
Chromosome Location . End  9588834 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27C8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009186 trcs-1 F27C8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27C8.6 F27C8.6 1287   IV: 9587269-9587409

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27C8.6.1 9587096 9588834 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137997   314   IV: 9587096-9587409 Caenorhabditis elegans
Exon137998   240   IV: 9587512-9587751 Caenorhabditis elegans
Exon137999   720   IV: 9587803-9588522 Caenorhabditis elegans
Exon138000   246   IV: 9588589-9588834 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27C8.6.1 9587096 9588834 -1

1 Sequence

Length
1520

1 Sequence Ontology Term

Identifier Name Description
transcript