WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G6.2b.1 Sequence Name  F58G6.2b.1
Length (nt)  651   Chromosome Location  IV: 9649043-9650490
Chromosome . Primary Identifier  IV Chromosome Location . Start  9649043
Chromosome Location . End  9650490 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G6.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010273 srm-3 F58G6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G6.2b F58G6.2b 651   IV: 9649043-9649053

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G6.2b.1 9649043 9650490 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138174   11   IV: 9649043-9649053 Caenorhabditis elegans
Exon138176   184   IV: 9649594-9649777 Caenorhabditis elegans
Exon138178   195   IV: 9649906-9650100 Caenorhabditis elegans
Exon138181   156   IV: 9650181-9650336 Caenorhabditis elegans
Exon138183   105   IV: 9650386-9650490 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G6.2b.1 9649043 9650490 1

1 Sequence

Length
651

1 Sequence Ontology Term

Identifier Name Description
transcript