WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G6.4b.1 Sequence Name  F58G6.4b.1
Length (nt)  1413   Chromosome Location  IV: 9660409-9663853
Chromosome . Primary Identifier  IV Chromosome Location . Start  9660409
Chromosome Location . End  9663853 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G6.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010275 acc-1 F58G6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G6.4b F58G6.4b 1413   IV: 9660409-9660420

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G6.4b.1 9660409 9663853 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138218   12   IV: 9660409-9660420 Caenorhabditis elegans
Exon138222   141   IV: 9660964-9661104 Caenorhabditis elegans
Exon138225   94   IV: 9661151-9661244 Caenorhabditis elegans
Exon138228   166   IV: 9661392-9661557 Caenorhabditis elegans
Exon138231   132   IV: 9661718-9661849 Caenorhabditis elegans
Exon138234   124   IV: 9661998-9662121 Caenorhabditis elegans
Exon138237   80   IV: 9662205-9662284 Caenorhabditis elegans
Exon138240   60   IV: 9662336-9662395 Caenorhabditis elegans
Exon138243   208   IV: 9662537-9662744 Caenorhabditis elegans
Exon138246   87   IV: 9662938-9663024 Caenorhabditis elegans
Exon138249   66   IV: 9663073-9663138 Caenorhabditis elegans
Exon138252   131   IV: 9663407-9663537 Caenorhabditis elegans
Exon138255   42   IV: 9663692-9663733 Caenorhabditis elegans
Exon138256   70   IV: 9663784-9663853 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G6.4b.1 9660409 9663853 1

1 Sequence

Length
1413

1 Sequence Ontology Term

Identifier Name Description
transcript