WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F58G6.4a Sequence Name  F58G6.4a
Length (nt)  1401   Chromosome Location  IV: 9660964-9661104
Chromosome . Primary Identifier  IV Chromosome Location . Start  9660964
Chromosome Location . End  9661104
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G6.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28039 ACC-1, isoform a 54.9 466 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00049060
WBRNAi00016021
WBRNAi00033135

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F58G6.4a 9660964 9661104 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010275 acc-1 F58G6.4 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:F58G6.4a 9660964 9661104 1
CDS:F58G6.4a 9661151 9661244 1
CDS:F58G6.4a 9661392 9661557 1
CDS:F58G6.4a 9661718 9661849 1
CDS:F58G6.4a 9661998 9662121 1
CDS:F58G6.4a 9662205 9662284 1
CDS:F58G6.4a 9662336 9662395 1
CDS:F58G6.4a 9662537 9662744 1
CDS:F58G6.4a 9662938 9663024 1
CDS:F58G6.4a 9663073 9663138 1
CDS:F58G6.4a 9663407 9663537 1
CDS:F58G6.4a 9663692 9663733 1
CDS:F58G6.4a 9663784 9663853 1

1 Sequence

Length
1401

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F58G6.4a.1 F58G6.4a.1 1646   IV: 9658053-9663983
Transcript:F58G6.4a.2 F58G6.4a.2 1703   IV: 9660272-9664006