WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F58G6.5a Sequence Name  F58G6.5a
Length (nt)  1500   Chromosome Location  IV: 9664684-9664794
Chromosome . Primary Identifier  IV Chromosome Location . Start  9664684
Chromosome Location . End  9664794
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G6.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27764 NHR-34, isoform a 57.1 499 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00049061
WBRNAi00033136
WBRNAi00092015
WBRNAi00107465

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F58G6.5a 9664684 9664794 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003627 nhr-34 F58G6.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F58G6.5a 9664684 9664794 -1
CDS:F58G6.5a 9664946 9665083 -1
CDS:F58G6.5a 9665130 9665290 -1
CDS:F58G6.5a 9665423 9665636 -1
CDS:F58G6.5a 9665684 9665872 -1
CDS:F58G6.5a 9666033 9666365 -1
CDS:F58G6.5a 9666465 9666681 -1
CDS:F58G6.5a 9666770 9666869 -1
CDS:F58G6.5a 9667001 9667037 -1

1 Sequence

Length
1500

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F58G6.5a.1 F58G6.5a.1 1863   IV: 9664365-9667081