WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G6.4a.1 Sequence Name  F58G6.4a.1
Length (nt)  1646   Chromosome Location  IV: 9658053-9663983
Chromosome . Primary Identifier  IV Chromosome Location . Start  9658053
Chromosome Location . End  9663983 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010275 acc-1 F58G6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G6.4a F58G6.4a 1401   IV: 9660964-9661104

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G6.4a.1 9658053 9663983 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138271   115   IV: 9658053-9658167 Caenorhabditis elegans
Exon138275   141   IV: 9660964-9661104 Caenorhabditis elegans
Exon138278   94   IV: 9661151-9661244 Caenorhabditis elegans
Exon138281   166   IV: 9661392-9661557 Caenorhabditis elegans
Exon138284   132   IV: 9661718-9661849 Caenorhabditis elegans
Exon138287   124   IV: 9661998-9662121 Caenorhabditis elegans
Exon138290   80   IV: 9662205-9662284 Caenorhabditis elegans
Exon138293   60   IV: 9662336-9662395 Caenorhabditis elegans
Exon138296   208   IV: 9662537-9662744 Caenorhabditis elegans
Exon138299   87   IV: 9662938-9663024 Caenorhabditis elegans
Exon138302   66   IV: 9663073-9663138 Caenorhabditis elegans
Exon138305   131   IV: 9663407-9663537 Caenorhabditis elegans
Exon138308   42   IV: 9663692-9663733 Caenorhabditis elegans
Exon138312   200   IV: 9663784-9663983 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G6.4a.1 9658053 9663983 1

1 Sequence

Length
1646

1 Sequence Ontology Term

Identifier Name Description
transcript