WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G6.4b.1 Sequence Name  F58G6.4b.1
Length (nt)  1413   Chromosome Location  IV: 9660409-9663853
Chromosome . Primary Identifier  IV Chromosome Location . Start  9660409
Chromosome Location . End  9663853 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G6.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010275 acc-1 F58G6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G6.4b F58G6.4b 1413   IV: 9660409-9660420

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G6.4b.1 9660409 9663853 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138273   12   IV: 9660409-9660420 Caenorhabditis elegans
Exon138277   141   IV: 9660964-9661104 Caenorhabditis elegans
Exon138280   94   IV: 9661151-9661244 Caenorhabditis elegans
Exon138283   166   IV: 9661392-9661557 Caenorhabditis elegans
Exon138286   132   IV: 9661718-9661849 Caenorhabditis elegans
Exon138289   124   IV: 9661998-9662121 Caenorhabditis elegans
Exon138292   80   IV: 9662205-9662284 Caenorhabditis elegans
Exon138295   60   IV: 9662336-9662395 Caenorhabditis elegans
Exon138298   208   IV: 9662537-9662744 Caenorhabditis elegans
Exon138301   87   IV: 9662938-9663024 Caenorhabditis elegans
Exon138304   66   IV: 9663073-9663138 Caenorhabditis elegans
Exon138307   131   IV: 9663407-9663537 Caenorhabditis elegans
Exon138310   42   IV: 9663692-9663733 Caenorhabditis elegans
Exon138311   70   IV: 9663784-9663853 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G6.4b.1 9660409 9663853 1

1 Sequence

Length
1413

1 Sequence Ontology Term

Identifier Name Description
transcript