WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G6.5d.1 Sequence Name  F58G6.5d.1
Length (nt)  1692   Chromosome Location  IV: 9664684-9669195
Chromosome . Primary Identifier  IV Chromosome Location . Start  9664684
Chromosome Location . End  9669195 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G6.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003627 nhr-34 F58G6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G6.5d F58G6.5d 1692   IV: 9664684-9664794

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G6.5d.1 9664684 9669195 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138317   111   IV: 9664684-9664794 Caenorhabditis elegans
Exon138323   138   IV: 9664946-9665083 Caenorhabditis elegans
Exon138328   161   IV: 9665130-9665290 Caenorhabditis elegans
Exon138333   214   IV: 9665423-9665636 Caenorhabditis elegans
Exon138338   189   IV: 9665684-9665872 Caenorhabditis elegans
Exon138343   333   IV: 9666033-9666365 Caenorhabditis elegans
Exon138348   217   IV: 9666465-9666681 Caenorhabditis elegans
Exon138353   100   IV: 9666770-9666869 Caenorhabditis elegans
Exon138359   216   IV: 9668861-9669076 Caenorhabditis elegans
Exon138360   13   IV: 9669183-9669195 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G6.5d.1 9664684 9669195 -1

1 Sequence

Length
1692

1 Sequence Ontology Term

Identifier Name Description
transcript