WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1251.9a.1 Sequence Name  ZK1251.9a.1
Length (nt)  5378   Chromosome Location  IV: 9696989-9706723
Chromosome . Primary Identifier  IV Chromosome Location . Start  9696989
Chromosome Location . End  9706723 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1251.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014243 dcaf-1 ZK1251.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1251.9a ZK1251.9a 5106   IV: 9697256-9697346

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1251.9a.1 9696989 9706723 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138364   358   IV: 9696989-9697346 Caenorhabditis elegans
Exon138366   358   IV: 9697477-9697834 Caenorhabditis elegans
Exon138369   340   IV: 9697917-9698256 Caenorhabditis elegans
Exon138370   411   IV: 9700002-9700412 Caenorhabditis elegans
Exon138371   168   IV: 9700472-9700639 Caenorhabditis elegans
Exon138372   318   IV: 9700685-9701002 Caenorhabditis elegans
Exon138374   129   IV: 9701089-9701217 Caenorhabditis elegans
Exon138375   259   IV: 9701712-9701970 Caenorhabditis elegans
Exon138376   142   IV: 9702017-9702158 Caenorhabditis elegans
Exon138377   193   IV: 9702200-9702392 Caenorhabditis elegans
Exon138378   195   IV: 9702461-9702655 Caenorhabditis elegans
Exon138379   134   IV: 9702714-9702847 Caenorhabditis elegans
Exon138380   518   IV: 9703331-9703848 Caenorhabditis elegans
Exon138381   173   IV: 9703989-9704161 Caenorhabditis elegans
Exon138382   118   IV: 9704209-9704326 Caenorhabditis elegans
Exon138383   107   IV: 9704376-9704482 Caenorhabditis elegans
Exon138384   139   IV: 9704549-9704687 Caenorhabditis elegans
Exon138385   302   IV: 9705017-9705318 Caenorhabditis elegans
Exon138386   204   IV: 9705409-9705612 Caenorhabditis elegans
Exon138387   151   IV: 9705677-9705827 Caenorhabditis elegans
Exon138388   41   IV: 9705910-9705950 Caenorhabditis elegans
Exon138389   294   IV: 9706007-9706300 Caenorhabditis elegans
Exon138390   151   IV: 9706351-9706501 Caenorhabditis elegans
Exon138391   175   IV: 9706549-9706723 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1251.9a.1 9696989 9706723 -1

1 Sequence

Length
5378

1 Sequence Ontology Term

Identifier Name Description
transcript