WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C28D4.2c Sequence Name  C28D4.2c
Length (nt)  1356   Chromosome Location  IV: 9732018-9732269
Chromosome . Primary Identifier  IV Chromosome Location . Start  9732018
Chromosome Location . End  9732269
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28D4.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49764 CKA-1, isoform c 51.8 451 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00041408
WBRNAi00011298
WBRNAi00029298
WBRNAi00102564
WBRNAi00084001
WBRNAi00084002
WBRNAi00083992

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C28D4.2c 9732018 9732269 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000509 cka-1 C28D4.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:C28D4.2c 9732018 9732269 -1
CDS:C28D4.2c 9732326 9732473 -1
CDS:C28D4.2c 9732522 9732652 -1
CDS:C28D4.2c 9732784 9732900 -1
CDS:C28D4.2c 9732947 9733013 -1
CDS:C28D4.2c 9733067 9733177 -1
CDS:C28D4.2c 9733223 9733325 -1
CDS:C28D4.2c 9733410 9733561 -1
CDS:C28D4.2c 9733609 9733745 -1
CDS:C28D4.2c 9733791 9733928 -1

1 Sequence

Length
1356

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C28D4.2c.1 C28D4.2c.1 1636   IV: 9731740-9733930