WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08D2.4d.1 Sequence Name  W08D2.4d.1
Length (nt)  1029   Chromosome Location  IV: 9804518-9805999
Chromosome . Primary Identifier  IV Chromosome Location . Start  9804518
Chromosome Location . End  9805999 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08D2.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001395 fat-3 W08D2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08D2.4d W08D2.4d 1029   IV: 9804518-9804826

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W08D2.4d.1 9804518 9805999 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon138647   309   IV: 9804518-9804826 Caenorhabditis elegans
Exon138649   129   IV: 9805138-9805266 Caenorhabditis elegans
Exon138651   301   IV: 9805314-9805614 Caenorhabditis elegans
Exon138655   107   IV: 9805665-9805771 Caenorhabditis elegans
Exon138659   183   IV: 9805817-9805999 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W08D2.4d.1 9804518 9805999 1

1 Sequence

Length
1029

1 Sequence Ontology Term

Identifier Name Description
transcript