WormMine: MRNA Transcript:W08D2.5c.1

• WormMine ID: Transcript:W08D2.5c.1
• Sequence Name: W08D2.5c.1
• Length (nt): 3624
• Chromosome Location: IV: 9817710-9824278
• Chromosome . Primary Identifier: IV
• Chromosome Location . Start: 9817710
• Chromosome Location . End: 9824278
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: W08D2.5c.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00012341	catp-6	W08D2.5	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:W08D2.5c	W08D2.5c	3624	IV: 9817710-9817842

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: Transcript:W08D2.5c.1
• Start: 9817710
• End: 9824278
• Strand: -1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

20 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon138714			133	IV: 9817710-9817842	Caenorhabditis elegans
Exon138717			180	IV: 9817898-9818077	Caenorhabditis elegans
Exon138720			179	IV: 9818121-9818299	Caenorhabditis elegans
Exon138723			387	IV: 9818779-9819165	Caenorhabditis elegans
Exon138726			212	IV: 9819212-9819423	Caenorhabditis elegans
Exon138729			388	IV: 9819468-9819855	Caenorhabditis elegans
Exon138732			163	IV: 9819903-9820065	Caenorhabditis elegans
Exon138735			194	IV: 9820110-9820303	Caenorhabditis elegans
Exon138738			331	IV: 9820350-9820680	Caenorhabditis elegans
Exon138741			221	IV: 9820729-9820949	Caenorhabditis elegans
Exon138744			104	IV: 9820996-9821099	Caenorhabditis elegans
Exon138747			142	IV: 9821157-9821298	Caenorhabditis elegans
Exon138750			105	IV: 9821346-9821450	Caenorhabditis elegans
Exon138757			120	IV: 9823096-9823215	Caenorhabditis elegans
Exon138759			129	IV: 9823267-9823395	Caenorhabditis elegans
Exon138761			79	IV: 9823441-9823519	Caenorhabditis elegans
Exon138763			111	IV: 9823568-9823678	Caenorhabditis elegans
Exon138765			344	IV: 9823726-9824069	Caenorhabditis elegans
Exon138767			52	IV: 9824134-9824185	Caenorhabditis elegans
Exon138768			50	IV: 9824229-9824278	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:W08D2.5c.1
• Start: 9817710
• End: 9824278
• Strand: -1

1 Sequence

• Length: 3624

1 Sequence Ontology Term

• Name: transcript