WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W08D2.5c Sequence Name  W08D2.5c
Length (nt)  3624   Chromosome Location  IV: 9817710-9817842
Chromosome . Primary Identifier  IV Chromosome Location . Start  9817710
Chromosome Location . End  9817842
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08D2.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46061 CATP-6, isoform c 135.1 1207 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00001518
WBRNAi00054975
WBRNAi00019715
WBRNAi00076748
WBRNAi00036373
WBRNAi00066537
WBRNAi00078098
WBRNAi00113892

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W08D2.5c 9817710 9817842 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012341 catp-6 W08D2.5 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:W08D2.5c 9817710 9817842 -1
CDS:W08D2.5c 9817898 9818077 -1
CDS:W08D2.5c 9818121 9818299 -1
CDS:W08D2.5c 9818779 9819165 -1
CDS:W08D2.5c 9819212 9819423 -1
CDS:W08D2.5c 9819468 9819855 -1
CDS:W08D2.5c 9819903 9820065 -1
CDS:W08D2.5c 9820110 9820303 -1
CDS:W08D2.5c 9820350 9820680 -1
CDS:W08D2.5c 9820729 9820949 -1
CDS:W08D2.5c 9820996 9821099 -1
CDS:W08D2.5c 9821157 9821298 -1
CDS:W08D2.5c 9821346 9821450 -1
CDS:W08D2.5c 9823096 9823215 -1
CDS:W08D2.5c 9823267 9823395 -1
CDS:W08D2.5c 9823441 9823519 -1
CDS:W08D2.5c 9823568 9823678 -1
CDS:W08D2.5c 9823726 9824069 -1
CDS:W08D2.5c 9824134 9824185 -1
CDS:W08D2.5c 9824229 9824278 -1

1 Sequence

Length
3624

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W08D2.5c.1 W08D2.5c.1 3624   IV: 9817710-9824278